Noteworthy changes in hichipper

Split .fastq files as input to HiC-Pro

As of version 0.5.3 of hichipper, users should be able to input split .fastq files into HiC-Pro and have hichipper function properly. No extra user flags are needed for this functionality. Thanks to our early users for helping us figure this out.

A note on duplicates

In certain versions (0.4.4 to 0.5.3) of hichipper, duplicates were not being filtered out by default.